Plant MITE

SE2510666

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1896
Brachypodium distachyon
SE2510666
Tc1/Mariner
St40
Bd1:4990616-4990681
TA
TACTCCCTCCGATCCATAATAAGTGTCGGG

Secondary structure and sequence

TSD TIR

5'

3'

             C   AAT          CAA
TACTCCCTCCGAT CAT   AAGTGTCGGG   
||||||||||||| |||   ||||||||||    
ATGAGGGAGGCTA GTA   TTCACAGCCC   
             A   CTC          CTA

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510666

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510666