SE2510669

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1899
  • Brachypodium distachyon
  • SE2510669
  • Tc1/Mariner
  • St10
  • Bd4:3027616-3027732
  • TA
  • TACTCCCTCCGATCCATATTAGTTGTCTCAAATTTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TC    -    CTAAATATGG         T  -  AA
TACTCCCTCCGATCCATATTAGTTGTC  AAAT TTGC          ATGTATCTA GC CT  
|||||||||||||||||||||||||||  |||| ||||          ||||||||| || ||   
ATGAGGGAGGCTAGGTATAATTAACAG  TTTA AATG          TACATAGAT CG GA  
                           -T    T    ----------         C  T  AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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