SE2510690

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1920
  • Brachypodium distachyon
  • SE2510690
  • Tc1/Mariner
  • St22
  • Bd3:28138498-28138615
  • TA
  • TACTCCCTCCGTCCCATACTAAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                  C     GACTCAACTTT   T      AA    ATCTA     TAAA
TACTCCCTCCGTCCCATA TAAGT           GTC AAATAT  ACGT     TATAC    
|||||||||||||||||| |||||           ||| ||||||  ||||     |||||     
ATGAGGGAGGCAGGGTAT ATTCA           CGG TTTATA  TGTA     ATATG    
                  A     -----------   C      -A    CATAC     CATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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