SE2530695

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1925
  • Brachypodium distachyon
  • SE2530695
  • hAT
  • Hat14
  • Bd2:34102939-34103140
  • ACGGAGGT
  • GTCAGGGGCGGACCCAGCCGGGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
ACGGAG     G           -----------CC     ---       T   TCCACCCCACCCAATAAATTTGAATATCTTTTTATATCATAAGTAAAAACTAT
      GTCAG GGCGGACCCAG             GGGTG   ATTGGGT GGG                                                     
      ||||| |||||||||||             |||||   ||||||| |||                                                     A
      CAGTC CCGCCTGGGTT             CCCAC   TGTTACA TAA                                                     
TGGAAG     A           CAAAAGTTGTAAC     TTT       -   AAGTTATAACCCACCCCGTTTATGTAACGTTAGGATAAAAAAGGATTATAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3