SE2530715

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1945
  • Brachypodium distachyon
  • SE2530715
  • hAT
  • Hat35
  • Bd3:42962771-42962930
  • CGCGCACA
  • GCGCACAGTGGCGGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
C    A           CT   ATAAAGCCAAATGAACCCAATGAAAAAGCTAATTCTTTCACTAATTTAGTCTTTGTTT
 GCGC CAGTGGCGGAG  GCT                                                          
 |||| |||||||||||  |||                                                           
 CGCG GTCACCGCTTC  TCT                                                          
A    C           AA   CTTAATCCGTTAACCGAAGCTAGGGAAATTCATACACATTAAAAAGTGATTTATTCGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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