SE2510780

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2010
  • Brachypodium distachyon
  • SE2510780
  • Tc1/Mariner
  • St10
  • Bd1:48631640-48631756
  • TA
  • TACTCCCTCCGTTCCATAATTCTTGTCTCAAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TC      GCCTAAAAA  G         TT -  AA
TACTCCCTCCGTTCCATAATTCTTGTC  AAATTT         TG ATGTATCTG  C CT  
|||||||||||||||||||||||||||  ||||||         || |||||||||  | ||   
ATGAGGGAGGCAAGGTATTAAGAACAG  TTTAGA         AT TACATAGAT  G GA  
                           -C      ---------  G         CT T  AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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