Plant MITE

SE2510852

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2082
Brachypodium distachyon
SE2510852
Tc1/Mariner
St44
scaffold_9:15553-15644
TA
TACTCCCTCCGTCTCATAATTCTTGTCGTTGTTTTAGTACAAAT

Secondary structure and sequence

TSD TIR

5'

3'

            C             C          TA     TC
TACTCCCTCCGT TCATAATTCTTGT GTTGTTTTAG  CAAAT  
|||||||||||| ||||||||||||| ||||||||||  |||||   
ATGAGGGAGGCA GGTATTAAGAACA CAACAAAATC  GTTTA  
            A             A          CA     AA

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510852

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510852