SE2530894

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2124
  • Brachypodium distachyon
  • SE2530894
  • hAT
  • Hat36
  • Bd1:48362351-48362499
  • TAGGGTTG
  • TAGGGTTGCAAGTGGGCTCCCACCTAAGTCACACTTCTAATTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
                C             A        ----A    -AATTTTCAATT          -     A
TAGGGTTGCAAGTGGG TCCCACCTAAGTC CACTTCTA     TTCA            TTAGTTCAAA TTTTG 
|||||||||||||||| ||||||||||||| ||||||||     ||||            |||||||||| ||||| G
ATCCCAACGTTCACCC AGGGTGGATTCAG GTGAAGAT     AAGT            GATCAAGTTT AGAAC 
                A             G        CGATC    AAACCATAAAAC          T     T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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