SE2510898

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2128
  • Brachypodium distachyon
  • SE2510898
  • Tc1/Mariner
  • St10
  • Bd5:20707851-20707967
  • TA
  • TACTCCCTCCGATCCTAAATTGTTGTCGAAATATTACATGTATCTAGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
         C           G -----------    G      TAC         GA GCTT
TACTCCCTC GATCCTAAATT T           TGTC AAATAT   ATGTATCTA  C    
||||||||| ||||||||||| |           |||| ||||||   |||||||||  |    T
ATGAGGGAG CTAGGATTTAA A           ACGG TTTATA   TACATAGAT  G    
         A           G ACTGAGTTTAA    G      -CC         AA AATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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