SE2510901

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2131
  • Brachypodium distachyon
  • SE2510901
  • Tc1/Mariner
  • St10
  • Bd1:56914711-56914827
  • TA
  • TACTCCCTCCGACCCATATTACTTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
            C              TCAAATTTGTTC      - G        --      A
TACTCCCTCCGA CCATATTACTTGTC            AAATAT G ATGTATCT  ATGTTT 
|||||||||||| ||||||||||||||            |||||| | ||||||||  |||||| A
ATGAGGGAGGCT GGTATAATGAACAG            TTTATA T TACATAGA  TGCGAA 
            A              -----------C      A G        TC      A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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