SE2510908

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2138
  • Brachypodium distachyon
  • SE2510908
  • Tc1/Mariner
  • St10
  • Bd2:31716612-31716728
  • TA
  • TACTCCCTCCGATCCTAAATTCTTGACTCAAATTTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
                     C   AC  -    -       AATATGGATGTATCTATT
TACTCCCTCCGATCCTAAATT TTG  TC AAAT TTGCCCA                  
||||||||||||||||||||| |||  || |||| |||||||                  C
ATGAGGGAGGCTAGGATTTAA AAC  AG TTTA AATGTAC                  
                     C   --  C    T       ATAGATCTGCGAAAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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