SE2510933

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2163
  • Brachypodium distachyon
  • SE2510933
  • Tc1/Mariner
  • St10
  • Bd2:20842754-20842870
  • TA
  • TACTCCCTCCGTTCCATAATTCTTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
    CC       C             TCAAAT    CTAAAAATGA         TT TTAA
TACT  CTCCGTT CATAATTCTTGTC      TTAT          ATGTATCTA  C    
||||  ||||||| |||||||||||||      ||||          |||||||||  |    A
ATGA  GAGGCAA GTATTAAGAACAG      AATG          TACATGGAT  G    
    AA       A             CTTTAT    ----------         CC TAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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