SE2510947

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2177
  • Brachypodium distachyon
  • SE2510947
  • Tc1/Mariner
  • St23
  • Bd2:50740944-50741040
  • TA
  • TACTCCCTCCGATCCAAAATAAGTGTCGCGGCTTTGAACTAGATTTGAACTAGGCTTAGTTCAAATCTGAGACACTTATTTTGGATCGGAGGGAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                           G   C          A    A
TACTCCCTCCGATCCAAAATAAGTGTC CGG TTTGAACTAG TTTG 
||||||||||||||||||||||||||| ||| |||||||||| |||| A
ATGAGGGAGGCTAGGTTTTATTCACAG GTC AAACTTGATT GGAT 
                           A   T          C    C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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