SE2510951

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2181
  • Brachypodium distachyon
  • SE2510951
  • Tc1/Mariner
  • St10
  • Bd1:43461532-43461648
  • TA
  • TACTCCCTCCGTTCCATAATTCTTGTCTCAAATTTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TC    -    CTAAATATGG         TT CTAA
TACTCCCTCCGTTCCATAATTCTTGTC  AAAT TTGC          ATGTATCTA  C    
|||||||||||||||||||||||||||  |||| ||||          |||||||||  |    A
ATGAGGGAGGCAAGGTATTAAGAACAG  TTTA AATG          TACATAGAT  G    
                           -T    T    ----------         CT CAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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