SE2510960

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2190
  • Brachypodium distachyon
  • SE2510960
  • Tc1/Mariner
  • St21
  • Bd2:21646052-21646174
  • TA
  • TACTCCCTCCGTTCCTAAATACTTGTCATGGTTTTAGTGCAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
                           A               CTCC  TC     TA TTG
TACTCCCTCCGTTCCTAAATACTTGTC TGGTTTTAGTGCAAA    GT  CTAAA  C   
||||||||||||||||||||||||||| |||||||||||||||    ||  |||||  |   T
ATGAGGGAGGCAAGGATTTATGAACAG ACCAAAATCACGTTT    CG  GATTT  G   
                           C               -AAA  -T     TG TGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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