Plant MITE

SE2510962

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2192
Brachypodium distachyon
SE2510962
Tc1/Mariner
St23
Bd2:50062599-50062693
TA
TACTCCCTCCGATCCATAATAAGTGTCTTTGATTTAGTACAACTTT

Secondary structure and sequence

TSD TIR

5'

3'

                   TA      T              C   AG
TACTCCCTCCGATCCATAA  AGTGTC TTGATTTAGTACAA TTT  
|||||||||||||||||||  |||||| |||||||||||||| |||  T
ATGAGGGAGGCTAGGTATT  TCACAG GACTAAATCATGTT AAA  
                   --      C              A   CA

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510962

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510962