Plant MITE

SE2510978

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2208
Brachypodium distachyon
SE2510978
Tc1/Mariner
St16
Bd4:4195677-4195804
TA
TACTCCCTCCGTCCAACAAAGGATGTCTCAACTTTGACTAAATTTGAATGCATCTATACA

Secondary structure and sequence

TSD TIR

5'

3'

                               C    A T       A   C     T   CTAA
TACTCCCTCCGTCCAACAAAGGATGTCTCAA TTTG C AAATTTG ATG ATCTA ACA    
||||||||||||||||||||||||||||||| |||| | ||||||| ||| ||||| |||     
ATGAGGGAGGCAGGTTGTTTTCTACAGAGTT AAAC G TTTAAAC TAC TAGAT TGT    
                               C    A T       C   A     C   ACTG

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510978

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510978