SE2550979

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2209
  • Brachypodium distachyon
  • SE2550979
  • PIF/harbinger
  • To46
  • Bd5:16109698-16109850
  • CTT
  • C

Secondary structure and sequence

TSD    TIR
5'



3' 
              GAAATAGGGATGCAAACGGGATCCCGTGAAAGTTCCGCTTCTTGTTCAATTTTCAAATCTCCTATTC
          CTTA                                                                   
          ||||                                                                   T
          CCCT                                                                   
AAAGATTCAT    AGGTGGACGCTTTCAGGGTGAAGATCAAGTAAAGAGTTTAGAAGATAAGTTTTAAAACGAGTTTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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