SE2511060

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2290
  • Brachypodium distachyon
  • SE2511060
  • Tc1/Mariner
  • St16
  • Bd3:28897944-28898041
  • TA
  • TACTCCCTCCGATCCATAAAAAGTGTCGCCCACTTTGTACTAAGTT

Secondary structure and sequence

TSD    TIR
5'



3'
                                   T    T     AGT
TACTCCCTCCGATCCATAAAAAGTGTCGCCCACTT GTAC AAGTT   
||||||||||||||||||||||||||||||||||| |||| |||||    
ATGAGGGAGGCTAGGTATTTTTCACAGCGGGTGAA CATG TTTAG   
                                   T    T     ACA

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End