SE2551120

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2350
  • Brachypodium distachyon
  • SE2551120
  • PIF/harbinger
  • To11
  • Bd3:21612584-21612759
  • TAA
  • AGGCTCAGTTTGGCATTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      A            TGAAC    C  CGCTGAACTTATTTCATAATCTGCTGTGGAAAAATACACACAAAAGTAGGAAAAAG
  AGGCTC GTTTGGCATTGC     TGTG TG                                                        
  |||||| ||||||||||||     |||| ||                                                        T
  TCCGAG CAAACCGTAACG     CCTA AT                                                        
AA      G            --CCA    -  AGTATTAGGGCAAAAAAAAAGTGGGCGAAAAGTAATAAAAACACAAACCGATTGGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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