SE0430137

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2507
  • Brassica rapa
  • SE0430137
  • hAT
  • Hat7
  • A03:9003879-9004101
  • GTCCTCCA
  • CAGGGGCGAATCC

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCCTCCA          T  A    AA       GTGGGTGCAAAATTTAATAACGCAGTAAGGAAGGTTCAAACTTGAGACATTAAGGGGTGCACAAGACAACTAAACCAT
        CAGGGGCGAA CC GAAT  TTTTCTT                                                                              
        |||||||||| || ||||  |||||||                                                                              C
        GTCCCCGCTT GG TCTC  GATGGTG                                                                              
 CCTCCTG          C  -    --       ATACCACCGTGTACGGGGGCATTAAAATACTTATAATTCAAAAAACATACATTTTCATGTTTCTTTAGTCGATCTATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3