SE0450159

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2529
  • Brassica rapa
  • SE0450159
  • PIF/harbinger
  • To3
  • A08:13751430-13751597
  • TTA
  • TAAGGCTTCGAATG

Secondary structure and sequence

TSD    TIR
5'



3' 
T              TTTACAATCGCC    CCCGCACCGCAGTTAACAGTAACAAAAATCTCTATATATACCATATATCTATACGTT
 TAAGGCTTCGAATG            CTGT                                                         
 ||||||||||||||            ||||                                                         T
 ATTCCGAGGCTTAC            TGAC                                                         
A              ---------CAC    GCCAAACTCTCCACGCCCTGTTTGCCAAGTTAACGCCACGCCAAAATTGTCAATATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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