SE0420266

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2636
  • Brassica rapa
  • SE0420266
  • Mutator
  • M8
  • A04:3294362-3294522
  • TAAAGTTTT
  • AAAGTTTTGGGTGAATTG

Secondary structure and sequence

TSD    TIR
5'



3' 
T           T      GTTTAAA -    AAAAAAATGAAAATACCTATGATGTGACTAGTTTGTGTCTATGGAAAAAAGT
 AAAGTTTTGGG GAATTG       A CCCT                                                    
 ||||||||||| ||||||       | ||||                                                    A
 TTTTGAAATCC TTTAAC       T GGGT                                                    
            C      ------G G    ATGTGATCTGAAAATGGGATTAATTGGTTTATGGAATTTAGGGTGTTACAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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