SE1630026

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2707
  • Manihot esculenta
  • SE1630026
  • hAT
  • Hat2
  • scaffold03581:173958-174129
  • TGTATATC
  • GTATATCCAGGGGCGGAGGGAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T      C                ------     --   A GGGGCACGTGCCGTACCGGCGACCGAAAAATGCTTTGAAGGGGGATGA
 GTATAT CAGGGGCGGAGGGAGG      GTACG  GCA G                                                
 |||||| ||||||||||||||||      |||||  ||| |                                                A
 TATATG GTCCCCGCCTCCCTCC      GAAAC  TCC C                                                
C      T                TCAAGG     CA   - GTGGCGACGCGTGACGACGCCGTGGTGGCCGACGCGGCGACGCCGTGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3