SE1720027

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2768
  • Ricinus communis
  • SE1720027
  • Mutator
  • M11
  • 29842:916772-916983
  • CTTAAGGAA
  • GGAAGGAAAATTCTTGTCTAGGCTTAGTGTATATCTCAATCTATA

Secondary structure and sequence

TSD    TIR
5'



3' 
 CTTAA   A    A                --          T    CT   TATCAAACCAATA    ATTGACACATATTCATTAGTTTTAAATGATTGAAGCATGT
      GGA GGAA ATTCTTGTCTAGGCTT  AGTGTATATC CAAT  ATA             GATG                                        
      ||| |||| ||||||||||||||||  |||||||||| ||||  |||             ||||                                        G
      TCT CCTT TAAGAATGGATCCGAA  TCATATGTGG GTTA  TAT             TGTG                                        
AAGAAA   -    C                CC          T    AT   -----CCTCTCAC    CATACATACTCACAAAATGTGAAACCATAACCTACTGACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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