SE4220004

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2772
  • Cajanus cajan
  • SE4220004
  • Mutator
  • M1
  • Scaffold000408:78771-78971
  • TATATTTAA
  • AGAGTTAATCACCTATACACTGTCAGTGTAAAGTTTTTTTACACTGGTAACCAATTATATCTTTTAATTGTGCCATGTCACTATAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TATATTTA                                                   C                    C         -A    CACAT
        AGAGTTAATCACCTATACACTGTCAGTGTAAAGTTTTTTTACACTGGTAAC AATTATATCTTTTAATTGTG CATGTCACT  TAAA     
        ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||      
        TCTCAATTAGTGGATATGTGACAGTCACATTTCAAAAAAATGTGACCGTTG TTAATATAGAAAATTAACAC GTACAGTGA  ATTT     
AATTTATA                                                   A                    A         CA    TCATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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