SE4250030

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2798
  • Cajanus cajan
  • SE4250030
  • PIF/harbinger
  • To10
  • Scaffold125985:20605-20740
  • TAA
  • ATAGCGTGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA    C       CATTAGTGTTAG    -    AAAATCACGTTTGATAGGAAGCAATAAACAATAGCTTCT
  ATAG GTGTTTG            AAAC GTGA                                       
  |||| |||||||            |||| ||||                                       G
  TATC CACAAAC            CTTT TGCA                                       
AA    A       ------------    A    AACATGTGTAAGAGAGAGGTGCAGGTTGTATTAAAATGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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