SE4250059

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2827
  • Cajanus cajan
  • SE4250059
  • PIF/harbinger
  • To19
  • Scaffold127472:295669-295812
  • TTA
  • AGTGCATGTTTGGATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT             A  AGATT   A       TTCTA   ----TCTCTC       TGAATATGAATTTTA
  AGTGCATGTTTGG TT     TTC AACGTGA     CAC          TCCACGT               
  ||||||||||||| ||     ||| |||||||     |||          |||||||               C
  TCACGTACAAACT AA     AAG TTGCACT     GTG          TCGTTTT               
AT             C  -GGTT   A       TAAAA   CAAATCAACT       AAAAAAATGAAGGTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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