SE4250061

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2829
  • Cajanus cajan
  • SE4250061
  • PIF/harbinger
  • To20
  • Scaffold000117:167722-167855
  • TTA
  • AGTGCGTGTTTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    C         AACA   CCA   C -     TGAAGCAAAAATCACATTTAAAACGCAAAAGC
  AGTG GTGTTTGGT    CGT   AAA G TGATT                                
  |||| |||||||||    |||   ||| | |||||                                T
  TCAC CACAAACCA    TAA   AAC T GCACT                                
AT    A         ATTT   ---   - T     ATTTAGTGCAGTTTTACCTTCGATAGTCAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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