SE4250067

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2835
  • Cajanus cajan
  • SE4250067
  • PIF/harbinger
  • To23
  • CcLG09:3766808-3766951
  • TGA
  • AGTGTGTGTTTGGATA

Secondary structure and sequence

TSD    TIR
5'



3' 
TG  T             -AAA     --  TTAACTCAACCCACTTTTACTTCAAAGCAATAGTCTTGTTGC
  AG GTGTGTTTGGATA    GTTGA  GT                                          
  || |||||||||||||    |||||  ||                                          T
  TC CACACAAACCTAT    GAAGT  CG                                          
AG  C             AGGC     TT  TACCCTTACACACAAAAGTGAAGGGTTACGTACTTTAGGTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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