SE4250096

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2864
  • Cajanus cajan
  • SE4250096
  • PIF/harbinger
  • To19
  • Scaffold127472:295669-295812
  • TAA
  • AGTGCATGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA            --A   C ---   TCTAACGTGAATTTTCACGTTTAGTTGAAGCAAAATTTTTTTACTTC
  AGTGCATGTTTG   GTT C   AAT                                               
  ||||||||||||   ||| |   |||                                                
  TCACGTACAAAC   ATC T   AGT                                               
AA            CTA   - AAA   TTGCACTAAGATGTGAGAGAGAGGTGCAACTTATACTTAAAATGCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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