SE4250102

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2870
  • Cajanus cajan
  • SE4250102
  • PIF/harbinger
  • To29
  • CcLG08:2500158-2500280
  • ATA
  • GTGTGTCTGGATCCGC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATATA      C   ------A     -GTTCAAAAATC      ---   CA            T
     GTGTGT TGG       TCCGC            ACGTTA   ACG  GAAGTAAGAAAT 
     |||||| |||       |||||            ||||||   |||  |||||||||||| T
     CGCACA ACC       AGGCG            TGCAGT   TGC  TTTTATTCTTTA 
ATAAC      A   AAAGTGG     GTGTGAATTAAA      TTT   AC            T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3