SE4250105

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2873
  • Cajanus cajan
  • SE4250105
  • PIF/harbinger
  • To22
  • Scaffold126240:154683-154816
  • TTA
  • ATAGTGTGTTTGCTTCCGCGTCAATAACG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            C  CC    -CAA     TGAT          AAAT  A   TAAATAGTTTTTACT
  ATAGTGTGTTTG TT  GCGT    TAACG    TTTTCACGTC    CG AAG               
  |||||||||||| ||  ||||    |||||    ||||||||||    || |||                
  TATCGCACAAAC AA  CGCA    GTTGT    AAAAGTGCAG    GT AAG               
AT            A  AT    AAAA     --TT          ----  -   ATGAACTTTGCGCCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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