SE4220107

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2875
  • Cajanus cajan
  • SE4220107
  • Mutator
  • M14
  • CcLG02:7697233-7697446
  • CAAGGTTTG
  • CAAGGTTTGGGGGATTGCTCCGGTGCCCTCTTATTTGAAGGGGTTTTGGTGCCCCTCAGTACAAAAGTTGGGTTTTTAGGGGCAATAAGGTAAATTGATAG

Secondary structure and sequence

TSD    TIR
5'



3' 
    G      GG              C                                                                         CCTTCA
CAAG TTTGGG  ATTGCTCCGGTGCC TCTTATTTGAAGGGGTTTTGGTGCCCCTCAGTACAAAAGTTGGGTTTTTAGGGGCAATAAGGTAAATTGATAG      
|||| ||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
GTTT GAACCC  TAACGAGGCCACGG AGAATAAACTTCCCCAAAACCACGGGGAGTCATGTTTTCAACCCAAAAATCCCCGTTATTCCATTTAACTATT      
    G      GA              A                                                                         TAACAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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