SE4250126

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2894
  • Cajanus cajan
  • SE4250126
  • PIF/harbinger
  • To33
  • CcLG11:8711737-8711881
  • TAA
  • GGGTGTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAA  -           TAAA  TTC    AAAT     CGTACGTTCATCTAAAAGATACCTCACACTTGCTTCTCCA
   GG GTGTGTTTGTA    TG   GTCT    GTGAA                                        
   || |||||||||||    ||   ||||    |||||                                         
   TC CATACAAACCT    AA   AGGC    AAACT                                        
 AA  A           ----  ---    ----     CTTCGAAGTTTGCCTGTTAGGGTTAAAGGTTTCGTGTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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