SE4250130

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2898
  • Cajanus cajan
  • SE4250130
  • PIF/harbinger
  • To35
  • CcLG02:21574501-21574645
  • TGA
  • GCGTGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TGAGT         GT     ------ TATTAAACTC   TTTTCCTTTTCTTTCCACGTCCGATTCTAAATTTACAGA
     GCGTGTTTG  TTGGA      T          AAG                                       
     |||||||||  |||||      |          |||                                       G
     CGCACAAAC  AGTCG      T          GCA                                       
AGTAT         AT     ACACTC ----------   CTAAAAAGTGCAAATCCGACTTCATTTTTTATCAATAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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