SE4250132

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2900
  • Cajanus cajan
  • SE4250132
  • PIF/harbinger
  • To36
  • Scaffold000011:671874-672017
  • TAA
  • TGTTTGGTTTATCGTTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAGAGCA                G  -    G  AAATGGAGTAAACACACATTCCAAAGCACCAAACTGA
        TGTTTGGTTTATCGTT GA TTTA TT                                     
        |||||||||||||||| || |||| ||                                     G
        ACAAACCAAATGGCAG CT TGGG GT                                     
AATCACAC                G  T    T  TTTAGTGCAAGTTGTTTTTTCTATTTTTTACAATGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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