SE4250134

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2902
  • Cajanus cajan
  • SE4250134
  • PIF/harbinger
  • To21
  • Scaffold132540:77242-77385
  • TTA
  • TAGGGTGTGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T    -          -----   --         TTCAACGTAATTTTTTTTTAATCAAATGGGACAAAAAAGTT
 TAGG GTGTGTTTGG     AAA  AAAATTACG                                         
 |||| ||||||||||     |||  |||||||||                                         A
 ATTC CACACAAACC     ACA  TTTTAAGTA                                         
     A          AAATA   AA         AGTTGCTTAAAAATGTGTAAGATTATGTGGTTTATCTGTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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