SE4250138

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2906
  • Cajanus cajan
  • SE4250138
  • PIF/harbinger
  • To15
  • CcLG07:15859218-15859361
  • TAA
  • AGTGCGTGTTTGCTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                  ATTTAGAA      TTTTTCACTCTCTCTCCAC   TACAAGCCAATTTACGTAGAAGCTA
  AGTGCGTGTTTGCTTTAG        ACGTGA                   GTT                         
  ||||||||||||||||||        ||||||                   |||                         C
  TCACGCACAAACGAAATC        TGCACT                   TTA                         
AA                  -GAAAACC      ------------------T   AATGCACACACTTTTCGTTTTTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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