SE4250142

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2910
  • Cajanus cajan
  • SE4250142
  • PIF/harbinger
  • To39
  • CcLG03:21051318-21051460
  • TAA
  • AGTGCGTGTTTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  T          TTTTCATTTTCAAACGTAAT      CTCTCTCCACGTCCATGTATTCATTTACGGATAA
  AG GCGTGTTTGA                    TTTATC                                  
  || ||||||||||                    ||||||                                  A
  TC CGCACAAACT                    TGCACT                                  
AA  T          --------CAACCTCAGACC      TTTTAGTGCAAAGTAATCTTCATTTTTTATAATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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