SE4220160

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2928
  • Cajanus cajan
  • SE4220160
  • Mutator
  • M13
  • Scaffold136876:285940-286176
  • GTATAAGTC
  • CGGAAATGGATCCCCCGACTTTGTAGAGGGAAAGTTAGGGTAATTTAATACATTTCAACAGTTAGATTTGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
GTATAAGT    AA     C C C       TA            G                     A       T     TAAAT                       TTTAAGTTA
        CGGA  TGGAT C C GACTTTG  GAGGGAAAGTTA GGTAATTTAATACATTTCAAC GTTAGAT TGTAA     GATTAGATTGTGACACGTGTACA         
        ||||  ||||| | | |||||||  |||||||||||| ||||||||||||||||||||| ||||||| |||||     |||||||||||||||||||||||         A
        GCCT  GCCTA G G CTGAAAC  CTTTCTTTCAAT CCATTGAATTATGTAGAGTTG CAATTTA ATATT     TTAGTCTAACACTGTGCACATGT         
CTGAATAT    AG     A A A       TC            A                     G       C     TTTAT                       TATATATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3