SE4250162

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2930
  • Cajanus cajan
  • SE4250162
  • PIF/harbinger
  • To5
  • Scaffold000207:37298-37422
  • TTG
  • GTGTGTTTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGGA          TTTTC  TTTCGTACAGTTAAAC    -  T            T A    TCATAC
     GTGTGTTTGT     CG                GTGG GT CATTTTAAAGCA C AAAC      
     ||||||||||     ||                |||| || |||||||||||| | ||||       
     CACACAAACA     GC                CATC CA GTAAGGTTTCGT G TTTG      
GTTCA          TATTA  ----------------    A  C            T C    CTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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