SE0550021

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2986
  • Capsella rubella
  • SE0550021
  • PIF/harbinger
  • To11
  • scaffold_6:16376312-16376429
  • TTA
  • AGAGCATCATCAATGCAAGGTTCTTGCACTTAAGATTTACACATGAGAGGATCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT  AG                                             GAT   AT
  AG  CATCATCAATGCAAGGTTCTTGCACTTAAGATTTACACATGAGAG   CTT  
  ||  |||||||||||||||||||||||||||||||||||||||||||||   |||   
  TC  GTAGTAGTTACGTTCCAAGAACGTGAATTCTAAATGTGTACTCTC   GAA  
AT  CA                                             ATT   TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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