SE0550024

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2989
  • Capsella rubella
  • SE0550024
  • PIF/harbinger
  • To12
  • scaffold_5:9263674-9263811
  • TAA
  • AGACCAACATTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  AC  A     CCAA                         C                       AT
  AG  CA CATTA    TGGGATCTTAGAGGCTAAGATCCCT GGTTTTTGCAAAGGAAAGATCTT  
  ||  || |||||    ||||||||||||||||||||||||| |||||||||||||||||||||||   
  TC  GT GTAAT    ACCCTAGAATCTCCGATTCTAGGGG CCAAAAATGTTTCTTTTTTAGAA  
AA  CC  A     AACC                         T                       TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3