SE0550060

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3025
  • Capsella rubella
  • SE0550060
  • PIF/harbinger
  • To12
  • scaffold_2:11559975-11560112
  • TTA
  • AGGGCAACATTATTGGTGGGATTTTAGAGGCTAAGATCCCCCGGTTTTTACAAAGAAAAAATCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   G                                    C        A     A   A     AT
  AGG CAACATTATTGGTGGGATTTTAGAGGCTAAGATCCC CGGTTTTT CAAAG AAA ATCTT  
  ||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||   
  TCT GTTGTAATAGTTACCCTAGAATCTCCGATTCTAGGG GCCAAAAA GTTTC TTT TAGAA  
AT   G                                    A        C     C   C     TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3