SE0510085

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3050
  • Capsella rubella
  • SE0510085
  • Tc1/Mariner
  • St2
  • scaffold_3:10147660-10147913
  • TA
  • TACTCCCTCTGTTTCATTATAAGTGATGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                               AA  TT    CACACTAAATAATAAAACATATAACTTACCAATTTTCCATAACAACATCATTAACTAATATGAATTCAACCAATAAGAAAATATGATG
TACTCCCTCTGTTTCATTATAAGTGATGTTT  GG  TTGG                                                                                        
|||||||||||||||||||||||||||||||  ||  ||||                                                                                         
ATGAGGGAGACAAAGTAATATTCACTACAAA  AT  CGGT                                                                                        
                               --  --    TTTTTTAAAACAAAGTCATATTCACTACAAAAGTTAAAGGATACGTTTTTGAATTACATAAATTATAAAAAACTGGTTAATATAAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3