SE4540019

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3107
  • Cannabis sativa
  • SE4540019
  • CACTA
  • Ca2
  • scaffold28302:6671-7015
  • TGG
  • GCACTACAAGAAATGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TG                C            A   TTCGCTACTGCGCTGGTAAAAGTAATTTTTACCAGCACATTTCGCAAATTGCGCTGGCAAAGAGGTCAAAGTTTTACCAGCGTACATTTGCAGTGGCTAAAATCTAACTTTTACCAGCACATTTACGCGTAGGGAAAA
  GCACTACAAGAAATGT ACTTTTACCAGC CAG                                                                                                                                          
  |||||||||||||||| |||||||||||| |||                                                                                                                                           
  TGTGATGTTCTTTACA TGAAAACGGTCG TGT                                                                                                                                          
GG                A            -   AAAAACACGACCGTTTTCAACCATAACACGACCATTTTATCTTAAATGAACACTACACAACCGTTTTCCCCCAACCGTTTAGTTACAACCATAATCTTGAAAACGGTCGTATTTTACTTTTCGCGACCGTTTTTACTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3