SE4520091

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3179
  • Cannabis sativa
  • SE4520091
  • Mutator
  • M13
  • scaffold139113:4771-4971
  • TTTGAATAT
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
                TTTGA    - A  ATTGCTAAAGGGCGCTACTGGTGACTAGCACCCTCCTTAGTGTCATACCGCTATTGGTATAATTAAATAGCAAGTCCCA
                     ATAT G GA                                                                               
                     |||| | ||                                                                               T
                     ACCC T GG                                                                               
TATAAGTTTCTCCTAACAATA    A -  TCTCCACGGGTCATGAAAAGTATCCACAGTGGAATACTAATCAATCGCTATAAAGAATTTTAAATAAAAGAATTCAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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