SE4620030

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3281
  • Eucalyptus grandis
  • SE4620030
  • Mutator
  • M11
  • scaffold_2:31904622-31904864
  • GATTACGAG
  • GAGAAAATATTGGGTGGTCCGGGACCGCACGACAGTGGGGTCCCGGACCACTCACGCGGCGCCACGTGTAAGGGGAGGGAACCA

Secondary structure and sequence

TSD    TIR
5'



3' 
GATTACGAGG                  C         -   A     G                               A          AC  ---------AA    CTGCCCCTGTCCCATC
          GAGAAAATATTGGGTGGT CGGGACCGC ACG CAGTG GGTCCCGGACCACTCACGCGGCGCCACGTGT AGGGGAGGGA  CA           GGAC                
          |||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||||||  ||           ||||                T
          CTCTTTTATAACCCACCA GTCCTGGTG TGC GTCGC CCAGGGTTTGGTGAGTGCGCCGCGGTGCACA TCCTCTCCCT  GT           CTCC                
GGAGCATTAG                  T         A   A     A                               C          CT  CTCTTCTCTTT    TCTCTCTCGGAGTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3