SE3950012

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3910
  • Vitis vinifera
  • SE3950012
  • PIF/harbinger
  • To3
  • chr11:5419062-5419186
  • TTA
  • AGAGTGCGTTTGACAGTTATTCTAGGAAGTGTTTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            AC   T                   CCATG               TTT
  AGAGTGCGTTTG  AGT ATTCTAGGAAGTGTTTCTA     TCTAATACTTGGAAA   
  ||||||||||||  ||| |||||||||||||||||||     |||||||||||||||   T
  TCTCACGCAAAC  TCA TAAGATCCTTCACAAAGAT     AGATTATGAACTTTT   
AT            CA   C                   TAGAA               TAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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